SubtiBank SubtiBank
ydeP [2018-02-09T08:50:09.000Z]
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ydeP [2018-02-09T08:50:09.000Z]

MarR/DUF24 family transcription regulator
locus
BSU05290
pI
9.40
mw
15.07 kDa
protein length
128 aa Sequence Blast
gene length
384 bp Sequence Blast
function
unknown
product
MarR/DUF24 family transcription regulator
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    575,712 → 576,098

    The protein

    Protein family

  • [[MarR/DUF24 family]]

    • Paralogous protein(s)

  • [protein|91085DA5E71B88E533D2E1D1BFB53E908116C6AA|HypR], [protein|C57DDC9710CB557179B062F9C5D786DB02A3B5FC|YkvN], [protein|E757C4B329A99E3D0C70C77437DF4DDA300CA5E7|YdzF]

    • Expression and Regulation

    Operons

    genes
    [gene|51B1913B59C1876CCED4A88414797B3A22BE4E3C|ydeP]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C167 (ydeP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2165 NBRP B. subtilis, Japan]
  • BKE05290 (Δ[gene|51B1913B59C1876CCED4A88414797B3A22BE4E3C|ydeP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGCTGTTCACTCCTAATA, downstream forward: _UP4_TAATAACCAGAAAAAATACC
  • BKK05290 (Δ[gene|51B1913B59C1876CCED4A88414797B3A22BE4E3C|ydeP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGCTGTTCACTCCTAATA, downstream forward: _UP4_TAATAACCAGAAAAAATACC